Qi H., Lv Z., Diao J., Tao X., Hu J., Xu J., Botnar R., Prieto C., Hu P. (2024)

3D B1+corrected simultaneous myocardial T1 and T1? mapping with subject-specific respiratory motion correction and water-fat separation

MAGNETIC RESONANCE IN MEDICINE

Machado I., Puyol-Anton E., Hammernik K., Cruz G., Ugurlu D., Olakorede I., Oksuz I., Ruijsink B., Castelo-Branco M., Young A., Prieto C., Schnabel J., King A. (2024)

A Deep Learning-Based Integrated Framework for Quality-Aware Undersampled Cine Cardiac MRI Reconstruction and Analysis

IEEE TRANSACTIONS ON BIOMEDICAL ENGINEERING 71 3 855-865

Phair A., Fotaki A., Felsner L., Fletcher T., Qi H., Botnar R., Prieto C. (2024)

A motion-corrected deep-learning reconstruction framework for accelerating whole-heart magnetic resonance imaging in patients with congenital heart disease

JOURNAL OF CARDIOVASCULAR MAGNETIC RESONANCE 26 1

Fenski M., Abazi E., Groeschel J., Hadler T., Kappelmayer D., Kolligs F., Prieto C., Botnar R., Kunze K., Schulz-Menger J. (2024)

Cardiovascular magnetic resonance reveals myocardial involvement in patients with active stage of inflammatory bowel disease

Clinical Research in Cardiology

Hua A., Velasco C., Munoz C., Milotta G., Fotaki A., Bosio F., Granlund I., Sularz A., Chiribiri A., Kunze K., Botnar R., Prieto C., Ismail T. (2024)

Evaluation of myocarditis with a free-breathing three-dimensional isotropic whole-heart joint T1 and T2 mapping sequence

JOURNAL OF CARDIOVASCULAR MAGNETIC RESONANCE 26 2

Aizaz M., van der Pol J., Schneider A., Munoz C., Holtackers R., van Cauteren Y., van Langen H., Meeder J., Rahel B., Wierts R., Botnar R., Prieto C., Moonen R., Kooi M. (2024)

Extended MRI-based PET motion correction for cardiac PET/MRI

EJNMMI Physics 11 1

Si D., Crabb M., Kunze K., Littlewood S., Prieto C., Botnar R. (2024)

Free-breathing 3D whole-heart joint T1/T2 mapping and water/fat imaging at 0.55 T

MAGNETIC RESONANCE IN MEDICINE

Fotaki A., Pushparajah K., Rush C., Munoz C., Velasco C., Neji R., Kunze K., Botnar R., Prieto C. (2024)

Highly efficient free-breathing 3D whole-heart imaging in 3-min: single center study in adults with congenital heart disease

JOURNAL OF CARDIOVASCULAR MAGNETIC RESONANCE 26 1

Castillo-Passi C., Kunze K., Crabb M., Munoz C., Fotaki A., Neji R., Irarrazaval P., Prieto C., Botnar R. (2024)

Highly efficient image navigator based 3D whole-heart cardiac MRA at 0.55T

MAGNETIC RESONANCE IN MEDICINE

Wood G., Hahosseiny R., Uglebjerg A., Littlewood S., Juul Hansen T., Neji R., Kunze K., Wetzl J., Linde B., Moller J., Maeng M., Lav Madsen P., Vejlstrup N., Prieto C., Botnar R., Yong Kim W. (2024)

Image navigator–based, automated coronary magnetic resonance angiography for the detection of coronary artery stenosis

Journal of Cardiovascular Magnetic Resonance 26 2

Zhang Q., Fotaki A., Ghadimi S., Wang Y., Doneva M., Wetzl J., Delfino J., O'Regan D., Prieto C., Epstein F. (2024)

Improving the efficiency and accuracy of cardiovascular magnetic resonance with artificial intelligence-review of evidence and proposition of a roadmap to clinical translation

JOURNAL OF CARDIOVASCULAR MAGNETIC RESONANCE 26 2

Craft J., Weber J., Li Y., Cheng J., Diaz N., Kunze K., Schmidt M., Grgas M., Weber S., Tang J., Parikh R., Onuegbu A., Yamashita A., Haag E., Fuentes D., Czipo M., Neji R., Espada C., Figueroa L., Rothbaum J., Fujikura K., Bano R., Khalique O., Prieto C. (2024)

Inversion recovery and saturation recovery pulmonary vein MR angiography using an image based navigator fluoro trigger and variable-density 3D cartesian sampling with spiral-like order

INTERNATIONAL JOURNAL OF CARDIOVASCULAR IMAGING

Schneider A., Munoz C., Hua A., Ellis S., Jeljeli S., Kunze K., Neji R., Reader A., Reyes E., Ismail T., Botnar R., Prieto C. (2024)

Non-rigid motion-compensated 3D whole-heart T2 mapping in a hybrid 3T PET-MR system

MAGNETIC RESONANCE IN MEDICINE 91 5 1951-1964

Spieker, V. et al. (2024). Self-supervised k-Space Regularization for Motion-Resolved Abdominal MRI Using Neural Implicit k-Space Representations. In: Linguraru, M.G., et al. Medical Image Computing and Computer Assisted Intervention – MICCAI 2024. MICCAI 2024. Lecture Notes in Computer Science, vol 15007. Springer, Cham. https://doi.org/10.1007/978-3-031-72104-5_59 (2024)

Self-supervised k-Space Regularization for Motion-Resolved Abdominal MRI Using Neural Implicit k-Space Representations

Medical Image Computing and Computer Assisted Intervention – MICCAI 2024. MICCAI 2024. Lecture Notes

Spieker V., Eichhorn H., Stelter J., Huang W., Braren R., Rueckert D., Sahli F., Hammernik K., Prieto C., Karampinos D., Schnabel J (2024)

Self-supervised k-Space Regularization for Motion-Resolved Abdominal MRI Using Neural Implicit k-Space Representations

Medical Image Computing and Computer Assisted Intervention – MICCAI 2024. MICCAI 2024

Tripp D., Kunze K., Crabb M., Prieto C., Neji R., Botnar R. (2024)

Simultaneous 3D T1, T2 and fat-signal-fraction mapping with respiratory-motion correction for comprehensive liver tissue characterization at 0.55?T

Magnetic Resonance in Medicine

Wood G., Pedersen A., Kunze K., Neji R., Hajhosseiny R., Wetzl J., Yoon S., Schmidt M., Norgaard B., Prieto C., Kim W., Botnar R. (2023)

Automated detection of cardiac rest period for trigger delay calculation for image-based navigator coronary magnetic resonance angiography

JOURNAL OF CARDIOVASCULAR MAGNETIC RESONANCE 25 1

Eck B., Yim M., Hamilton J., da Cruz G., Li X., Flamm S., Tang W., Prieto C., Seiberlich N., Kwon D. (2023)

Cardiac Magnetic Resonance Fingerprinting: Potential Clinical Applications

Current Cardiology Reports 25 3 119-131

6.Guglielmo, M., Rier, S., Zan, G. D., Krafft, A. J., Schmidt, M., Kunze, K. P., Botnar R, Prieto C., van der Heijden, J., Van Driel, V., Ramanna, H., van der Harst, P. & van der Bilt, I. Cardiac magnetic resonance for early atrial lesion visualization post atrial fibrillation radiofrequency catheter ablation. Journal of Cardiovascular Electrophysiology. 2024; 35: 258-266. doi:10.1111/jce.16152 (2023)

Cardiac magnetic resonance for early atrial lesion visualization post atrial fibrillation radiofrequency catheter ablation

Journal of Cardiovascular Electrophysiology 35 258-266

J Cardiovasc Magn Reson 25, 80 (2023). https://doi.org/10.1186/s12968-023-00981-6 (2023)

Combining generative modelling and semi-supervised domain adaptation for whole heart cardiovascular magnetic resonance angiography segmentation

J Cardiovasc Magn Reson 25 80

Mattioli A., Doltra A., Prieto C., Gallina S. (2023)

Editorial: Women in cardiovascular imaging

Frontiers in Cardiovascular Medicine 10

9.Dohy Z, Kiss M, Kunze K, Neji R, Szegedi N, Orbán G, Drobni Z, Suhai F, Czimbalmos C, Szabó L, Botnar RM, Prieto C, Merkely B, Vágó H. Feasibilityimage quality of Bright-blood and black-blOOd phase SensiTive inversion recovery (BOOST) sequence in clinical practice using for left atrial visualization in patients with atrial fibrillation. European Radiology 2023 Oct 7. doi: 10.1007/s00330-023-10257-3 (2023)

Feasibility and image quality of Bright-blood and black-blOOd phase SensiTive inversion recovery (BOOST) sequence in clinical practice using for left atrial visualization in patients with atrial fibrillation

European Radiology

Fotaki A., Pushparajah K., Hajhosseiny R., Schneider A., Alam H., Ferreira J., Neji R., Kunze K., Frigiola A., Prieto C., Botnar R. (2023)

Free-breathing, Contrast Agent-free Whole-Heart MTC-BOOST Imaging: Single-Center Validation Study in Adult Congenital Heart Disease

Radiology-Cardiothoracic Imaging 5 1

Cruz G., Hua A., Munoz C., Ismail T., Chiribiri A., Prieto C., Botnar R. (2023)

Low-rank motion correction for accelerated free-breathing first-pass myocardial perfusion imaging

MAGNETIC RESONANCE IN MEDICINE 90 1 64-78

Fujita S., Sano K., Cruz G., Velasco C., Kawasaki H., Fukumura Y., Yoneyama M., Suzuki A., Yamamoto K., Morita Y., Arai T., Fukunaga I., Uchida W., Kamagata K., Abe O., Kuwatsuru R., Saiura A., Ikejima K., Botnar R., Prieto C., Aoki S. (2023)

MR Fingerprinting for Contrast Agent-free and Quantitative Characterization of Focal Liver Lesions

Radiology-Imaging Cancer 5 6

Fotaki A., Velasco C., Prieto C., Botnar R. (2023)

Quantitative MRI in cardiometabolic disease: From conventional cardiac and liver tissue mapping techniques to multi-parametric approaches

Frontiers in Cardiovascular Medicine 9

Coletti C., Fotaki A., Tourais J., Zhao YD., van de Steeg-Henzen C., Akçakaya M., Tao Q., Prieto C., Weingärtner S. (2023)

Robust cardiac T1? mapping at 3T using adiabatic spin-lock preparations

Magnetic Resonance in Medicine 90 4

Munoz C., Fotaki A., Hua A., Hajhosseiny R., Kunze K., Ismail T., Neji R., Pushparajah K., Prieto C., Botnar R. (2023)

Simultaneous Highly Efficient Contrast-Free Lumen and Vessel Wall MR Imaging for Anatomical Assessment of Aortic Disease

JOURNAL OF MAGNETIC RESONANCE IMAGING 58 4 1110-1122

Cruz G., Hammernik K., Kuestner T., Velasco C., Hua A., Ismail T., Rueckert D., Prieto C., Kuestner T., Botnar R. (2023)

Single-heartbeat cardiac cine imaging via jointly regularized nonrigid motion-corrected reconstruction

NMR IN BIOMEDICINE 36 9

Amoiradaki K., Tomczyk M., da Cruz G., Velasco C., Bortolotti F., Prieto C., Giacca M., Phinikaridou A., Botnar R., Giacca M. (2023)

UNDERSTANDING THE ROLE OF CARDIAC FIBROSIS IN THE DEVELOPMENT AND TREATMENT OF HEART FAILURE USING MOLECULAR IMAGING PROBES AND NOVEL THERAPEUTICS

HEART 109 A308-A309

Orban G., Dohy Z., Suhai F., Nagy A., Sallo Z., Boga M., Kiss M., Kunze K., Neji R., Prieto C., Geller L., Merkely B., Vago H., Szegedi N., Botnar R. (2023)

Use of a new non-contrast-enhanced BOOST cardiac MR sequence before electrical cardioversion or ablation of atrial fibrillation-a pilot study

Frontiers in Cardiovascular Medicine 10

Messina P., Pino P., Parra D., Soto A., Besa C., Uribe S., Andía M., Tejos C., Prieto C., Capurro D. (2022)

A Survey on Deep Learning and Explainability for Automatic Report Generation from Medical Images

ACM Computing Surveys 37

Qi H., Lv Z., Hu J., Xu J., Botnar R., Prieto C., Hu P. (2022)

Accelerated 3D free-breathing high-resolution myocardial T1? mapping at 3 Tesla

Magnetic Resonance in Medicine 88 6 2520-2531

Fotaki A., Fuin N., Nordio G., Jimeno C. V., Qi H., Emmanuel Y., Pushparajah K., Botnar R., Prieto C. (2022)

Accelerating 3D MTC-BOOST in patients with congenital heart disease using a joint multi-scale variational neural network reconstruction

Magnetic Resonance Imaging 92 120-132

West DJ, Cruz G, Teixeira RPAG, Schneider T, Tournier JD, Hajnal JV, Prieto C, Malik SJ. An MR fingerprinting approach for quantitative inhomogeneous magnetization transfer imaging. Magn Reson Med. 2022 Jan;87(1):220-235. doi: 10.1002/mrm.28984. (2022)

An MR fingerprinting approach for quantitative inhomogeneous magnetization transfer imaging

Magn Reson Med 87 1 220-235

Velasco C., Fletcher T.J., Botnar R., Prieto C. (2022)

Artificial intelligence in cardiac magnetic resonance fingerprinting

Frontiers in Cardiovascular Medicine 9 1009131

Fotaki A., Puyol-Antón E., Chiribiri A., Botnar R., Pushparajah K., Prieto C. (2022)

Artificial Intelligence in Cardiac MRI: Is Clinical Adoption Forthcoming?

Frontiers in Cardiovascular Medicine 8 818765

Soyak R, Navruz E, Ersoy EO, Cruz G, Prieto C, King AP, Unay D, Oksuz I. Channel Attention Networks for Robust MR Fingerprint Matching. IEEE Trans Biomed Eng. 2022 Apr;69(4):1398-1405. doi: 10.1109/TBME.2021.3116877 (2022)

Channel Attention Networks for Robust MR Fingerprint Matching

IEEE Trans Biomed Eng 69 4 1398-1405

Qin C, Duan J, Hammernik K, Schlemper J, Küstner T, Botnar R, Prieto C, Price AN, Hajnal JV, Rueckert D. Complementary time-frequency domain networks for dynamic parallel MR image reconstruction. Magn Reson Med. 2021 Dec;86(6):3274-3291. doi: 10.1002/mrm.28917. (2022)

Complementary time-frequency domain networks for dynamic parallel MR image reconstruction

Magn Reson Med 86 6 3274-3291

Fotaki A., Munoz C., Emanuel Y., Hua A., Bosio F., Kunze K.P., Neji R., Masci P.G., Botnar R., Prieto C. (2022)

Efficient non-contrast enhanced 3D Cartesian cardiovascular magnetic resonance angiography of the thoracic aorta in 3 min

Journal of Cardiovascular Magnetic Resonance 24 1

Phair A., Cruz G., Qi H., Botnar R., Prieto C. (2022)

Free-running 3D whole-heart T1 and T2 mapping and cine MRI using low-rank reconstruction

Magnetic Resonance in Medicine 89 1 217-232

Nazir M. S., Bustin A., Hajhosseiny R., Yazdani M., Ryan M., Vergani V., Botnar R., Prieto C. (2022)

High-resolution non-contrast free-breathing coronary cardiovascular magnetic resonance angiography for detection of coronary artery disease: validation against invasive coronary angiography

Journal of Cardiovascular Magnetic Resonance 24 1

Ojha V., Khalique O. K., Khurana R., Lorenzatti D., Leung S. W., Lawton B., Prieto C. (2022)

Highlights of the Virtual Society for Cardiovascular Magnetic Resonance 2022 Scientific Conference: CMR: improving cardiovascular care around the world

Journal of Cardiovascular Magnetic Resonance 24 1

Kustner T, Pan J, Qi H, Cruz G, Gilliam C, Blu T, Yang B, Gatidis S, Botnar R, Prieto C. LAPNet: Non-Rigid Registration Derived in k-Space for Magnetic Resonance Imaging. IEEE Trans Med Imaging. 2021 Dec;40(12):3686-3697. doi: 10.1109/TMI.2021.3096131. (2022)

LAPNet: Non-Rigid Registration Derived in k-Space for Magnetic Resonance Imaging

IEEE Trans Med Imaging. 40 12 3686-3697

Munoz C., Fotaki A., Botnar R., Prieto C. (2022)

Latest Advances in Image Acceleration: All Dimensions are Fair Game

Journal of Magnetic Resonance Imaging

Rashid I., Ginami G., Nordio G., Fotaki A., Neji R., Alam H., Pushparajah K., Frigiola A., Valverde I., Botnar R., Prieto C. (2022)

Magnetization Transfer BOOST Noncontrast Angiography Improves Pulmonary Vein Imaging in Adults With Congenital Heart Disease

Journal of Magnetic Resonance Imaging

Fujita S., Sano K., Cruz G., Fukumura Y., Kawasaki H., Fukunaga I., Botnar R., Prieto C., Aoki S. (2022)

MR Fingerprinting for Liver Tissue Characterization: A Histopathologic Correlation Study

Radiology

Lima da Cruz G. J., Velasco C., Lavin B., Jaubert O., Botnar R., Prieto C. (2022)

Myocardial T1, T2, T2*, and fat fraction quantification via low-rank motion-corrected cardiac MR fingerprinting

Magnetic Resonance in Medicine 87 6 2757-2774

Zeilinger M. G., Kunze K. P., Munoz C., Neji R., Schmidt M., Croisille P., Botnar R., Prieto C. (2022)

Non-rigid motion-corrected free-breathing 3D myocardial Dixon LGE imaging in a clinical setting

European Radiology 32 7 4340-4351

Schneider A., Cruz G., Munoz C., Hajhosseiny R., Kuestner T., Kunze K. P., Botnar R., Prieto C. (2022)

Whole-heart non-rigid motion corrected coronary MRA with autofocus virtual 3D iNAV

Magnetic Resonance Imaging 87 169-176

Milotta G., Muñoz C., Kunze K., Neji R., Figliozzi S., Chiribiri A., Hajhosseiny R., Masci P., Prieto C., Botnar R. (2021)

3D whole-heart grey-blood late gadolinium enhancement cardiovascular magnetic resonance imaging

Journal of Cardiovascular Magnetic Resonance 23 62

Coronado R., Lima Da Cruz G., Castillo-Passi C., Tejos C., Uribe S., Prieto C., Irarrazaval P. (2021)

A spatial off-resonance correction in spirals for Magnetic Resonance Fingerprinting

IEEE Transactions on Medical Imaging

Correia T., Ginami G., Rashid I., Nordio G., Hajhosseiny R., Ismail T., Neji R., Botnar C., Prieto C. (2021)

Accelerated High-resolution Free-breathing 3D whole-heart T2-prepared Black-blood and Bright-blood Cardiac MRI

Journal of Cardiovascular Magnetic Resonance 22 88

Hajhosseiny R., Rashid I.,  Bustin A.,  Muñoz C., Cruz G.,  Nazir M., Grigoryan K.,  Ismail T., Preston R., Neji R.,  Kunze K.,  Razavi R.,  Chiribiri A.,  Masci P.,  Rajani R., Prieto C., Botnar R.  (2021)

Clinical comparison of sub-mm high-resolution non-contrast coronary CMR angiography against coronary CT angiography in patients with low-intermediate risk of coronary artery disease: a single center trial

Journal of Cardiovascular Magnetic Resonance 23 57

Küstner T., Muñoz C., Psenicny A., Bustin A., Fuin N., Qi H., Neji R., Kunze K., Hajhosseiny R., Prieto C., Botnar R. (2021)

Deep-learning based super-resolution for 3D isotropic coronary MR angiography in less than a minute

Magnetic Resonance in Medicine

Godino-Moya, A., Menchón-Lara R.M., Martín-Fernández M., Prieto C., Alberola-López C. (2021)

Elastic AlignedSENSE for Dynamic MR Reconstruction: A Proof of Concept in Cardiac Cine

Entropy

Qi H., Hajhosseiny R., Cruz G., Kuestner T., Kunze K., Neji R., Botnar R., Prieto C. (2021)

End-to-end deep learning nonrigid motion-corrected reconstruction for highly accelerated free-breathing coronary MRA

Magnetic Resonance in Medicine

Munoz C., Sim I., Neji R., Kunze KP., Masci P.G., Schmidt M., O'Neill M., Williams S., Botnar R.M., Prieto C. (2021)

Evaluation of accelerated motion-compensated 3d water/fat late gadolinium enhanced MR for atrial wall imaging

Magnetic Resonance Materials in Physics Biology and Medicine

Küstner T, Bustin A, Jaubert O, Hajhosseiny R., Masci P.G., Neji R., Botnar R., Prieto C. (2021)

Fully self-gated free-running 3D Cartesian cardiac CINE with isotropic whole-heart coverage in less than 2 min

NMR in Biomedicine e4409

Cruz G., Qi H., Jaubert O., Kuestner T., Schneider T., Botnar R., Prieto C. (2021)

Generalized low-rank nonrigid motion-corrected reconstruction for MR fingerprinting

Magnetic Resonance in Medicine 87 746-763

Bustin A., Hua A., Milotta G., Jaubert O., Hajhosseiny R., Ismail T.F., Botnar R., Prieto C. (2021)

High-resolution 3D Whole-Heart MRI T2 Mapping for Assessment of Myocarditis

Radiology 298 3

Munoz C, Ellis S, Nekolla SG, Kunze KP, Vitadello T, Neji R, Botnar RM, Schnabel JA, Reader AJ, Prieto C. MR-guided motion-corrected PET image reconstruction for cardiac PET-MR. J Nucl Med. 2021 May 28:jnumed.120.254235. doi: 10.2967/jnumed.120.254235. (2021)

MR-guided motion-corrected PET image reconstruction for cardiac PET-MR

J Nucl Med

Velasco C, , Cruz G., Jaubert O., Lavin B., Botnar R.M., Prieto C. (2021)

Simultaneous comprehensive liver T1, T2, T1p and fat fraction characterization with MR fingerprinting

Magnetic Resonance in Medicine

Velasco C, , Cruz G., Lavin B., Hua A., Fotaki A., Botnar R.M., Prieto C. (2021)

Simultaneous T1, T2, and T1? cardiac magnetic resonance fingerprinting for contrast agent–free myocardial tissue characterization

Magnetic Resonance in Medicine

Qi H., Cruz G., Botnar R., Prieto C. (2021)

Synergistic multi-contrast cardiac magnetic resonance image reconstruction

Philosophical Transactions of the Royal Society A

Zeilinger, M.G., Wiesmüller, M., Forman, C. et al. 3D Dixon water-fat LGE imaging with image navigator and compressed sensing in cardiac MRI. Eur Radiol (2020). https://doi.org/10.1007/s00330-020-07517-x (2020)

3D Dixon water-fat LGE imaging with image navigator and compressed sensing in cardiac MRI

European Radiology

Cruz G., Jaubert O., Qi H., Bustin A., Milotta G., Schneider T., Koken P., Doneva M., Botnar R.M., Prieto C. (2020)

3D free-breathing cardiac magnetic resonance fingerprinting

NMR in Biomedicine e4370

Milotta G, Bustin A, Jaubert O, Neji R, Prieto C, Botnar RM. (2020)

3D whole heart isotropic resolution motion compensated joint T1/T2 mapping and water/fat imaging

Magnetic Resonance in Medicine

Milotta G., Ginami G., Bustin A., Neji R., Prieto C., Botnar R.M. (2020)

3D whole-heart free-breathing qBOOST-T2 mapping

Magnetic Resonance in Medicine

Bustin A. , Rashid I, Cruz G, Hajhosseiny R., Correia T., Neji R., Rajani R., Ismail T., Botnar R.M., Prieto C. (2020)

3D Whole-Heart Isotropic Sub-Millimeter Resolution Coronary Magnetic Resonance Angiography with Non-Rigid Motion-Compensated PROST

Journal of Cardiovascular Magnetic Resonance 22 24

Fuin N., Bustin A., Kustner T., Oksuz I., Clough J., King A., Schnabel J., Botnar R.M., Prieto C. (2020)

A multi-scale variational neural network for accelerating motion-compensated whole-heart 3D coronary MR angiography

Magnetic Resonance Imaging 70 155-167

Roccia E, Vidya Shankar R, Neji R, Cruz G, Munoz C, Botnar RM, Goh V, Prieto C, Dregely I. Accelerated 3D T2 mapping with dictionary‐based matching for prostate imaging. Magn Reson Med 2019; 81(3):1795-1805. (2020)

Accelerated 3D T2 mapping with dictionary based matching for prostate imaging

Magn Reson Med 81 3 1795-1805

Vidya Shankar R, Roccia E, Cruz G, Neji R, Botnar R, Prezzi D, Goh V, Prieto C, Dregely I. Accelerated 3D T2 w-imaging of the prostate with 1-millimeter isotropic resolution in less than 3 minutes. Magn Reson Med. 2019; 82(2):721-731 (2020)

Accelerated 3D T2 w-imaging of the prostate with 1-millimeter isotropic resolution in less than 3 minutes

Magn Reson Med 82 2 721-731

Bustin A., Milotta G., Ismaail T., Neji R., Botnar R.M., Prieto C. (2020)

Accelerated free-breathing whole-heart 3D T2 mapping with high isotropic resolution

Magnetic Resonance in Medicine 83 3 988-1002

1.I Oksuz, B Ruijsink, E Puyol-Antón, JR Clough, G Cruz, A Bustin, C Prieto, R Botnar, D Rueckert, JA Schnabel, AP King. Automatic CNN-based detection of cardiac MR motion artefacts using k-space data augmentation and curriculum learning. Medical Image Analysis 2019; 55:136-147. (2020)

Automatic CNN-based detection of cardiac MR motion artefacts using k-space data augmentation and curriculum learning

Medical Image Analysis 55 136-147

B Eck, S Flamm, DH Kwon, WH Wilson Tang, C Prieto, N Seiberlich. Cardiac magnetic resonance fingerprinting: Trends in technical development and potential clinical applications. Progress in Nuclear Magnetic Resonance Spectroscopy 2020, 122:11-22 (2020)

Cardiac magnetic resonance fingerprinting: Trends in technical development and potential clinical applications

Progress in Nuclear Magnetic Resonance Spectroscopy 122 11-22

Küstner T., Fuin N., Hammernik K., Bustin A., Qi H., Hajhosseiny R., Masci P.G., Neji R., Rueckert D., Botnar R.M., Prieto C. (2020)

CINENet: deep learning-based 3D cardiac CINE MRI reconstruction with multi-coil complex-valued 4D spatio-temporal convolutions

Scientific Reports 10 13710

1.López K, Neji R, Mukherjee RK, Whitaker J, Phinikaridou A, Razavi R, Prieto C, Roujol S, Botnar R. Contrast-free high-resolution 3D magnetization transfer imaging for simultaneous myocardial scar and cardiac vein visualization. MAGMA 2020. doi: 10.1007/s10334-020-00833-9. (2020)

Contrast-free high-resolution 3D magnetization transfer imaging for simultaneous myocardial scar and cardiac vein visualization

MAGMA

Hajhosseiny R., Bustin A., Munoz C., Rashid I., Cruz G., Manning W.J., Prieto., Botnar R.M. (2020)

Coronary Magnetic Resonance Angiography: Technical Innovations Leading Us to the Promised Land?

JACC-Cardiovascular Imaging

I. Oksuz et al., "Deep Learning-Based Detection and Correction of Cardiac MR Motion Artefacts During Reconstruction for High-Quality Segmentation, " in IEEE Transactions on Medical Imaging, vol. 39, no. 12, pp. 4001-4010, Dec. 2020, doi: 10.1109/TMI.2020.3008930. (2020)

Deep Learning-Based Detection and Correction of Cardiac MR Motion Artefacts During Reconstruction for High-Quality Segmentation

IEEE Transactions on Medical Imaging

Nordio G., Bustin A., Odille F., Schneider T., Henningsson M., Prieto C., Botnar R.M. (2020)

Faster 3D saturation-recovery based myocardial T1 mapping using a reduced number of saturation points and denoising

PLOS One

Jaubert O., Cruz G., Bustin A., Schneider T., Koken P., Doneva M., Rueckert D., Botnar R.M., Prieto C. (2020)

Free-running cardiac magnetic resonance fingerprinting: Joint T1/T2 map and Cine imaging

Magnetic Resonance Imaging 68 173-182

Bustin A., Fuin N., Botnar R.M., Prieto C. (2020)

From Compressed-Sensing to Artificial Intelligence-Based Cardiac MRI Reconstruction

Frontiers in Cardiovascular Medicine 7 17

Bustin A., Lima da Cruz G., Jaubert O., Lopez K., Botnar R.M., Prieto C. (2020)

High-dimensionality undersampled patch-based reconstruction (HD-PROST) for accelerated multi-contrast MRI

Magnetic Resonance in Medicine 81 6 3705-3719

Küstner T., Bustin A., Jaubert O., Hajhosseiny R., Masci P.G., Neji R., Botnar R.M., Prieto C. (2020)

Isotropic 3D Cartesian single breath‐hold CINE MRI with multi‐bin patch‐based low‐rank reconstruction

Magnetic Resonance in Medicine

Weikert, T., Francone, M., Abbara, S. et al. Machine learning in cardiovascular radiology: ESCR position statement on design requirements, quality assessment, current applications, opportunities, and challenges. Eur Radiol (2020). https://doi.org/10.1007/s00330-020-07417-0 (2020)

Machine learning in cardiovascular radiology: ESCR position statement on design requirements, quality assessment, current applications, opportunities, and challenges

European Radiology

Munoz C., Cruz G., Neji R., Botnar R.M., Prieto C. (2020)

Motion corrected water/fat whole-heart coronary MR angiography with 100% respiratory efficiency

Magnetic Resonance in Medicine 82 2 732-742

Munoz C, Bustin A, Neji R, et al. Motion-corrected 3D whole-heart water-fat high-resolution late gadolinium enhancement cardiovascular magnetic resonance imaging. J Cardiovasc Magn Reson. 2020;22(1):53. Published 2020 Jul 20. doi:10.1186/s12968-020-00649-5 (2020)

Motion-corrected 3D whole-heart water-fat high-resolution late gadolinium enhancement cardiovascular magnetic resonance imaging

J Cardiovasc Magn Reson 22 1 53

A Mehranian, CJ McGinnity, R Neji, C Prieto, A Hammers, E De Vita, AJ Reader. Motion-corrected and high-resolution anatomically assisted (MOCHA) reconstruction of arterial spin labeling MRI: High-resolution ASL image reconstruction. Magn Reson Med 2020, doi: 10.1002/mrm.28205. (2020)

Motion-corrected and high-resolution anatomically assisted (MOCHA) reconstruction of arterial spin labeling MRI: High-resolution ASL image reconstruction

Magn Reson Med

Mehranian A, Belzunce M, McGinnity C, Bustin A, Prieto C, Hammers A, Reader A. Multi-modal synergistic PET and MR reconstruction using mutually weighted quadratic priors. Magn Reson Med 2019; 81(3):2120-2134. (2020)

Multi-modal synergistic PET and MR reconstruction using mutually weighted quadratic priors

Magn Reson Med 81 3 2120-2134

Jaubert O., Arrieta C., Cruz G., Bustin A., Schneider T., Georgiopoulos G., Masci P.G., Sing-Long C., Botnar R.M., Prieto C. (2020)

Multi-parametric Liver Tissue Characterization Using MR Fingerprinting: Simultaneous T1 , T2 , T2 *, and Fat Fraction Mapping

Magnetic Resonance in Medicine

Qi H, Fuin N, Cruz G, Pan J, Kuestner T, Bustin A, Botnar RM, Prieto C. Non-rigid Respiratory Motion Estimation of Whole-heart Coronary MR Images using Unsupervised Deep Learning. IEEE Trans Med Imaging. 2020 Oct 6;PP. doi: 10.1109/TMI.2020.3029205. Epub ahead of print. PMID: 33021937. (2020)

Non-rigid Respiratory Motion Estimation of Whole-heart Coronary MR Images using Unsupervised Deep Learning

IEEE Transactions on Medical Imaging

Aizaz M., Moonen R.P.M., van der Pol J.A.J., Prieto C., Botnar R.M., Kooi M.E. (2020)

PET/MRI of atherosclerosis

Cardiovascular Diagnosis & Therapy 10 4 1120-1139

López K, Neji R, Bustin A, Rashid I, Hajhosseiny R, Malik SJ, Teixeira RPAG, Razavi R, Prieto C, Roujol S, Botnar RM. Quantitative magnetization transfer imaging for non-contrast enhanced detection of myocardial fibrosis. Magn Reson Med. 2020 Nov 17. doi: 10.1002/mrm.28577. Epub ahead of print. PMID: 33201524. (2020)

Quantitative magnetization transfer imaging for non-contrast enhanced detection of myocardial fibrosis

Magnetic Resonance in Medicine

C Kolbitsch, R Bastkowski R, C Prieto, K Weiss, D Mainz, D Giese. Respiratory motion corrected 4D flow using golden radial phase encoding. Magn Reson Med 2020; 83(2):635-644. (2020)

Respiratory motion corrected 4D flow using golden radial phase encoding

Magn Reson Med 83 2 635-644

Qi H., Bustin A., Kuestner T., Hajhosseiny R., Cruz G., Kunze K., Neji R., Botnar R.M., Prieto C. (2020)

Respiratory motion-compensated high-resolution 3D whole-heart T1r mapping

Journal of Cardiovascular Magnetic Resonance 22 1 12

Milotta G., Ginami G., Cruz G., Neji R., Prieto C., Botnar R.M. (2020)

Simultaneous 3D whole-heart bright-blood and black blood imaging for cardiovascular anatomy and wall assessment with interleaved T2 prep-IR

Magnetic Resonance in Medicine 82 1 312-325

Ovtchinnikov E, Brown R, Kolbitsch C, Pasca E, Costa L, Thomas A, Efthimiou N, Mayer J, Wadhwa P, Ehrhardt J, Ellis S, Jorgense J, Matthews J, Prieto C, Reader AJ, Tsoumpas Ch, Turner M, Thielemans K. SIRF: Synergistic Image Reconstruction Framework. Computer Physics Communications 2020, 249, 107087, doi: 10.1016/j.cpc.2019.107087. (2020)

SIRF: Synergistic Image Reconstruction Framework.

Computer Physics Communications 249 107087

1.Godino-Moya A, Royuela-Del-Val J, Usman M, Menchón-Lara RM, Martín-Fernández M, Prieto C, Alberola-López C. Space-time variant weighted regularization in compressed sensing cardiac cine MRI. Magn Reson Imaging. 2019; 58:44-55. (2020)

Space-time variant weighted regularization in compressed sensing cardiac cine MRI.

Magn Reson Imaging 58 44-55

Jaubert, O., Cruz, G., Bustin, A., Hajhosseiny, R., Nazir, S., Schneider, T., Koken, P., Doneva, M., Rueckert, D., Masci, P.?G., Botnar, R.M.Prieto, C. (2020), T1, T2, and Fat Fraction Cardiac MR Fingerprinting: Preliminary Clinical Evaluation. J Magn Reson Imaging. https://doi.org/10.1002/jmri.27415 (2020)

T1, T2, and Fat Fraction Cardiac MR Fingerprinting: Preliminary Clinical Evaluation

Journal of Magnetic Resonance Imaging

Jaubert O., Cruz G., Bustin A., Lavin B., Koken P., Hajhosseiny R., Doneva M., Rueckert D., Botnar R.M., Prieto C. (2020)

Water/fat Dixon Cardiac Magnetic Resonance Fingerprinting

Magnetic Resonance in Medicine 83 6 2107-2123

Clough J, Balfour DR, Lima Da Cruz G, Marsden P, Prieto C, Reader A, King A. Weighted Manifold Alignment using Wave Kernel Signatures for Aligning Medical Image Datasets. IEEE Trans Pattern Anal Mach Intell. 2020, 42(4):988-997. doi: 10.1109/TPAMI.2019.2891600. (2020)

Weighted Manifold Alignment using Wave Kernel Signatures for Aligning Medical Image Datasets

IEEE Trans Pattern Anal Mach Intell 42 4 988-997

Nordio G., Schneider T., Cruz G., Correia T., Bustin A., Prieto C., Botnar R.M. (2020)

Whole-heart T1 mapping using a 2D fat image navigator for respiratory motion compensation

Magnetic Resonance in Medicine 83 1 178-187

Küstner T., Bustin A., Jaubert O., Neji R., Prieto C., Botnar R. (2019)

3D Cartesian Fast Interrupted Steady-State (FISS) Imaging

Magnetic Resonance in Medicine 82 5 1617-1630

Nordio G., Bustin A., Henningsson M., Rashid I., Chiribiri A., Ismail T., Odile F., Prieto C. and Botnar R.M. (2019)

3D SASHA myocardial T1 mapping with high accuracy and improved precision

Magnetic Resonance Materials in Physics Biology and Medicine

Cruz G., Jaubert O., Botnar R.M., Prieto C. (2019)

Cardiac Magnetic Resonance Fingerprinting: Technical Developments and Initial Clinical Validation

Current Cardiology Reports 21 9 91

Bustin A., Ginami G., Cruz G., Correia T., Tevfik I., Rashid I., Neji R., Botnar R., and Prieto C. (2019)

Five -Minute Whole -Heart Coronary MRA with Sub -millimeter Isotropic Resolution, 100% Respiratory Scan Efficiency and 3D-PROST Reconstruction

Magnetic Resonance in Medicine 81 1 102-115

Qi H., Jaubert O., Bustin A., Cruz G., Chen H., Botnar R., Prieto C. (2019)

Free-running 3D whole heart myocardial T1 mapping with isotropic spatial resolution

Magnetic Resonance in Medicine 82 4 1331-1342

Qi H, Bustin A, Cruz G, Jaubert O, Chen H, Botnar RM, Prieto C. Free-running simultaneous myocardial T1/T2 mappingcine imaging with 3D whole-heart coverage and isotropic spatial resolution. Magnetic Resonance Imaging 2019, 63:159-169. (2019)

Free-running simultaneous myocardial T1/T2 mapping and cine imaging with 3D whole-heart coverage and isotropic spatial resolution

Magnetic Resonance Imaging 63 159-169

Hajhosseiny R., Bahaei T.S., Prieto C., Botnar R.M. (2019)

Molecular and Nonmolecular Magnetic Resonance Coronary and Carotid Imaging

Arteriosclerosis, Thrombosis and Vascular Biology 39 4 569-582

Ginami G., López K., Mukherjee R.K., Neje R., Muñoz C., Roujol S., Mountney P., Razavi R., Botnar R.M. and Prieto C. (2019)

Non-contrast enhanced simultaneous 3D whole-heart bright-blood pulmonary veins visualization and black-blood quantification of atrial wall thickness

Magnetic Resonance in Medicine 81 2 1066-1079

Muñoz C., Neji R., Kunze K.P., Nekolla S., Botnar R.M. and Prieto C. (2019)

Respiratory and Cardiac Motion Corrected Simultaneous Whole-heart PET and Dual Phase Coronary MR Angiography

Magnetic Resonance in Medicine

Cruz G., Jaubert O., Schneider T., Botnar R.M. and Prieto C. (2019)

Rigid motion-corrected magnetic resonance fingerprinting

Magnetic Resonance in Medicine 81 2 947-961

Lima da Cruz G., Bustin A, Jaubert O, Schneider T., Botnar R.M., Prieto C. (2019)

Sparsity and locally low rank regularization for MR fingerprinting

Magnetic Resonance in Medicine 81 6 3530-3543

Cruz G., Schmeider T., Brujinen T., Gaspar A.S., Botnar R.M. and Prieto C. (2018)

Accelerated magnetic resonance fingerprinting using soft-weighted key-hole (MRF-SOHO)

PLOS One 13 8 18pp

Correia T., Cruz G., Schneider T., Botnar R.M. and Prieto C. (2018)

Accelerated nonrigid motion-compensated isotropic 3D coronary MR angiography

Medical Physics 45 1 214-222

Muñoz C., Neji R., Cruz G., Mallia A., Jeljeli S., Reader A.J., Botnar R.M. and Prieto C. (2018)

Motion Corrected Simultaneous Cardiac PET and Coronary MR Angiography with High Acquisition Efficiency

Magnetic Resonance in Medicine 79 1 339-350

Muñoz C., Kunze K.P., Neji R., Vitadello T., Rischpler C., Botnar R.M., Nekolla S.G. and Prieto C. (2018)

Motion-corrected whole-heart PET-MR for the simultaneous visualisation of coronary artery integrity and myocardial viability: an initial clinical validation

European Journal of Nuclear Medicine and Molecular Imaging 45 11 1975-1986

Correia T., Ginami G., Cruz G., Neji R., Rashid I., Botnar R.M. and Prieto C. (2018)

Optimized respiratory-resolved motion-compensated 3D Cartesian coronary MR angiography

Magnetic Resonance in Medicine 80 6 2618-2629

Ginami G., Neji R., Phinikaridou A., Whitaker J., Botnar R.M. and Prieto C. (2018)

Simultaneous bright- and black-blood whole-heart MRI for noncontrast enhanced coronary lumen and thrombus visualization

Magnetic Resonance in Medicine 79 3 1460-1472

Mehranian A, Belzunce M, Prieto C, Hammers A, Reader A. Synergistic PET and SENSE MR image reconstruction using joint sparsity regularization. IEEE Trans Med Imaging. 2018 Jan;37(1):20-34 doi: 10.1109/TMI.2017.2691044. (2018)

Synergistic PET and SENSE MR image reconstruction using joint sparsity regularization

IEEE Trans Med Imaging 37 1 20-34

Ginami G., Neji R., Rashid I., Chiribiri A., Ismail T.F., Botnar R.M. and Prieto C. (2017)

3D whole-heart phase sensitive inversion recovery CMR for simultaneous black-blood late gadolinium enhancement and bright-blood coronary CMR angiography

Journal of Cardiovascular Magnetic Resonance 19 1 14pp

Usman M., Ruijsink B., Nazir M.S., Cruz G. and Prieto C. (2017)

Free breathing whole-heart 3D CINE MRI with self-gated Cartesian trajectory

Magnetic Resonance Imaging 38 129-137

Chen X., Usman M., Baumgartner C.F., Balfour D.R., Marsden P.K., Reader A.J., Prieto C. and King A.P. (2017)

High-Resolution Self-Gated Dynamic Abdominal MRI Using Manifold Alignment

IEEE Transactions on Medical Imaging 36 4 960-971

Cruz G., Atkinson D., Henningsson M., Botnar R.M. and Prieto C. (2017)

Highly efficient nonrigid motion-corrected 3D whole-heart coronary vessel wall imaging

Magnetic Resonance in Medicine 77 5 1894-1908

Mehranian, Abolfazl; Belzunce, Martin; Niccolini, Flavia; Politis, Marios; Prieto, Claudia; Turkheimer, Frederico; Hammers, Alexander; Reader, Andrew (2017). PET image reconstruction using multi-parametric anato-functional priors. Physics in Medicine and Biology (2017)

PET image reconstruction using multi-parametric anato-functional priors

Physics in Medicine and Biology

Magn Reson Imaging. 2016 Mar 8. Accelerated Cardiac Cine MRI Using Locally Low Rank and Finite Difference Constraints.Miao X, Lingala SG, Guo Y, Jao T, Usman M, Prieto C, Nayak KS. (2016)

Accelerated Cardiac Cine MRI Using Locally Low Rank and Finite Difference Constraints

Magnetic Resonance Imaging

Cruz G., Atkinson D., Buerger C., Schaeffter T. and Prieto C. (2016)

Accelerated motion corrected three-dimensional abdominal MRI using total variation regularized SENSE reconstruction

Magnetic Resonance in Medicine 75 4 1484-1498

PET Clin. 2016 Apr;11(2):179-91. MR-Based Cardiac and Respiratory Motion-Compensation Techniques for PET-MR Imaging.Munoz C, Kolbitsch C, Reader AJ, Marsden P, Schaeffter T, Prieto C. (2016)

MR-Based Cardiac and Respiratory Motion-Compensation Techniques for PET-MR Imaging

PET Clinics 11 2 179-191

Aitken P.A., Henningsson M., Botnar R.M., Schaeffter T. and Prieto C. (2015)

100% Efficient three-dimensional coronary MR angiography with two-dimensional beat-to-beat translational and bin-to-bin affine motion correction

Magnetic Resonance in Medicine 74 3 756-764

Paschke N.K., Dössel O., Schaeffter T., Prieto C. and Kolbitsch C. (2015)

Comparison of Image Based and Reconstruction Based Respiratory Motion Correction for Coronary MR Angiography

Journal of Magnetic Resonance Imaging 42 4 964-971

Prieto C., Doneva M., Usman M., Henningsson M., Greil G., Schaeffter T. and Botnar R.M. (2015)

Highly efficient respiratory motion compensated free-breathing coronary mra using golden-step Cartesian acquisition

Journal of Magnetic Resonance Imaging 41 3 738-746

Usman M., Atkinson D., Kolbitsch C., Schaeffter T. and Prieto C. (2015)

Manifold learning based ECG-free free-breathing cardiac CINE MRI

Journal of Magnetic Resonance Imaging 41 6 1521-1527

Usman M., Atkinson D., Heathfield E., Greil G., Schaeffter T. and Prieto C. (2015)

Whole left ventricular functional assessment from two minutes free breathing multi-slice CINE acquisition

Physics in Medicine and Biology 60 7 N93-N97

Med Phys. 2014 Aug;41(8):082304. doi: 10.1118/1.4890095.A 3D MR-acquisition scheme for nonrigid bulk motion correction in simultaneous PET-MR.Kolbitsch C, Prieto C, Tsoumpas C, Schaeffter T. (2014)

A 3D MR-acquisition scheme for non-rigid bulk motion correction in simultaneous PET-MR

Medical Physics 41 8 082304

Kolbitsch C., Prieto C. and Schaeffter T. (2014)

Cardiac functional assessment without electrocardiogram using physiological self-navigation.

Magnetic Resonance in Medicine 71 3 942-954

Usman M., Vaillant G., Atkinson D., Schaeffter T. and Prieto C. (2014)

Compressive manifold learning: Estimating 1D respiratory motion directly from undersampled k-space data

Magnetic Resonance Imaging

Aitken AP, Giese D, Tsoumpas C, Schleyer P, Kozerke S, Prieto C, Schaeffter T.(2014). Improved UTE-based attenuation correction for cranial PET-MR using dynamic magnetic field monitoring. Medical Physics, 41(1):012302 (2014)

Improved UTE-based attenuation correction for cranial PET-MR using dynamic magnetic field monitoring.

Medical Physics 41 1 012302

Vaillant G., Prieto C., Kolbitsch C., Penney G. and Schaeffter T. (2014)

Retrospective rigid motion correction in k-space for segmented radial MRI.

IEEE Transactions on Medical Imaging 33 1 1-10

Knowles B.R., Peters D.C., Clough R.E., Razavi R., Schaeffter T. and Prieto C. (2014)

Three-dimensional late gadolinium-enhanced mr imaging of the left atrium: A comparison of spiral versus Cartesian k-space trajectories.

Journal of Magnetic Resonance Imaging 39 1 211-216

Milovic C., Oses C., Villalon M., Uribe S., Lizama C., Prieto C., Andia M., Irarrázaval P. and Tejos C. (2013)

Calcium (Ca2+) waves data calibration and analysis using image processing techniques. http://dx.doi.org/10.1186/1471-2105-14-162

BMC Bioinformatics 14 162

Usman M., Atkinson D., Odille F., Kolbitsch C., Vaillant G., Schaeffter T., Batchelor P., and Prieto C. (2013)

General motion corrected compressed sensing for highly accelerated MRI. http://dx.doi.org/10.1002/mrm.24463

Magnetic Resonance in Medicine 70 2 504-516

Prieto C., Usman M., Wild J.M., Kozerke S., Batchelor P.G. and Schaeffter T. (2013)

Group sparse reconstruction using intensity-based clustering. http://dx.doi.org/10.1002/mrm.24333

Magnetic Resonance in Medicine 69 4 1169-1179

Buerger C., Prieto C. and Schaeffter T. (2013)

Highly efficient 3D motion-compensated abdomen MRI from undersampled golden-RPE acquisitions.

Magnetic Resonance Materials in Physics Biology and Medicine 26 5 419-429

Henningsson M., Prieto C., Chiribiri A., Vaillant G., Razavi R. and Botnar R. (2013)

Whole-heart coronary MRA with 3D affine motion correction using 3D image-based navigation. http://dx.doi.org/10.1002/mrm.24652

Magnetic Resonance in Medicine

Prieto C., Andia M., von Bary C., Onthank D., Schaeffter T. and Botnar R. (2012)

Accelerating 3D molecular cardiovascular MR imaging using compressed sensing. http://dx.doi.org/10.1002/jmri.23763

Journal of Magnetic Resonance Imaging 36 6 1362-1371

Buerger C., Clough R.E., King A.P., Schaeffter T. and Prieto C. (2012)

Nonrigid motion modeling of the liver from 3-D undersampled self-gated golden-radial phase encoded MRI. http://dx.doi.org/10.1109/TMI.2011.2181997

IEEE Transactions on Medical Imaging 31 3 805-815